Application of Nanolive in Ferroptosis Research

Cell biologists observe various gene-determined, active, orderly forms of cell death during development, known as programmed cell death, including apoptosis, autophagy, pyroptosis, and ferroptosis. Ferroptosis is a metabolic form of non-apoptotic cell death characterized by iron-dependent lipid peroxidation, and it has garnered significant attention due to its strong correlation with human diseases such as neurodegenerative disorders, tissue damage from cold exposure, ischemia-reperfusion injury, and cancer.
Dr. Marcus Conrad’s team from the Helmholtz University in Munich, Germany, has published multiple articles on ferroptosis in the top international academic journal Nature, revealing the mechanisms behind ferroptosis.
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1. Vitamin K Effectively Inhibits Ferroptosis in Cells

Application of Nanolive in Ferroptosis Research

Ferroptosis is a non-apoptotic form of cell death marked by iron-dependent lipid peroxidation, playing a crucial role in the susceptibility to organ damage, degenerative diseases, and drug-resistant cancers. Despite substantial progress in understanding the molecular processes related to ferroptosis, other extracellular and intracellular processes determining a cell’s sensitivity to ferroptosis remain unknown. In this article, researchers found that the fully reduced form of vitamin K is a group of naphthoquinones, including methyl-naphthoquinone and phylloquinone, which not only serves as a cofactor for γ-glutamyl carboxylase in routine blood coagulation functions but also exhibits strong anti-ferroptosis properties.
Ferroptosis suppressor protein 1 (FSP1) is an NAD(P)H-ubiquinone reductase, which is the second pillar controlling ferroptosis after glutathione peroxidase, effectively reducing vitamin K to its hydroquinone form, an effective free radical scavenger and inhibitor of (phospho)lipid peroxidation. The FSP1-dependent non-classical vitamin K cycle can protect cells from harmful lipid peroxidation and ferroptosis.

Application of Nanolive in Ferroptosis Research

Fig.1: Images of HT-1080 cells treated with RSL3 (ferroptosis activator) without MK4 (methyl-naphthoquinone) and with MK4 (0.5 µM). Refer to Video 1 and Video 2. Scale bar = 10 μm. The right image shows the survival ability of HT-1080 cells treated with the indicated compounds and ferroptosis inducers. Phylloquinone (3 µM), MK4 (3 µM), Menadione (3 µM), or Lip1 (0.5 µM) were added 1 hour before the inducers.

Video 1 and Video 2: HT-1080 cells (80,000 cells) were seeded in a 35mm µ-plate and incubated overnight. The next day, after adding 0.5 µM RSL3 for 1 hour, 3 µM MK4 was added to the experimental group (Video 2), while the control group (Video 1) did not receive MK4. Live cell imaging was then performed using the 3D Cell Explorer and Eve software v1.8.2 (Nanolive).

Article link:

https://doi.org/10.1038/s41586-022-05022-3

2. FSP1 Phase Separation Promotes Ferroptosis Mechanism

Application of Nanolive in Ferroptosis Research

Application of Nanolive in Ferroptosis Research

Fig.1: Chemical structure of icFSP1.

The hallmark of ferroptosis is the iron-dependent oxidative destruction of the cell membrane, which can be counteracted by ferroptosis suppressor protein-1 (FSP1). Although FSP1 is considered an attractive drug target for cancer therapy, effective FSP1 inhibitors in vivo have been lacking. In this article, researchers carefully assessed a drug independent of GPX4 that induces ferroptosis from a screening of over 1000 compounds: a class of phenylquinazolinone compounds (named icFSP1), which is a specific inhibitor of FSP1. Importantly, they discovered the mechanism of action of icFSP1, which is based on triggering the phase separation of FSP1, a physical phenomenon in cells analogous to the separation of oil and water. In fact, icFSP1 strongly inhibited tumor growth in vivo, with evident FSP1 condensates in tumor tissues, proposing a new concept of combating tumors by promoting FSP1 phase separation and ferroptosis.

Application of Nanolive in Ferroptosis Research

Fig. 2: Representative delayed fluorescence images obtained after treating wild-type Gpx4 Pfa1 cells stably overexpressing hFSP1-EGFP-Strep with 2.5 µM icFSP1. Scale bar = 10 µm. Refer to Video 3.

Video 3: Representative delayed fluorescence images obtained after treating wild-type Gpx4 Pfa1 cells stably overexpressing hFSP1-EGFP-Strep with 2.5 µM icFSP1. The images show that before treatment with icFSP1, FSP1 was diffusely distributed in the cells; after treatment, FSP1 began to cluster, and the longer the treatment time, the more pronounced the clustering of FSP1. This indicates that icFSP1 affects the distribution of FSP1.

Video 4: Representative delayed fluorescence images before and after treating Gpx4 knockout Pfa1 cells stably overexpressing hFSP1-mTagBFP with 10 µM icFSP1. To test whether the change in hFSP1 subcellular localization would lead to ferroptosis, the authors established Gpx4 gene knockout Pfa1 cells that stably overexpressed hFSP1-BFP signal fused with blue fluorescent protein (BFP), using Liperfluo (a lipid peroxide sensor) and propidium iodide co-staining for live cell imaging to monitor, which can only stain the nucleus when the plasma membrane ruptures (i.e., marking ferroptotic cells). After treating the cells expressing hFSP1-BFP with icFSP1, punctate formation of FSP1 (blue fluorescence) was directly induced, followed by a gradual increase in lipid peroxide signals labeled by Liperfluo (green fluorescence) until the cells were marked by propidium iodide (PI, 0.2 µg/ml) (purple). This indicates that the change in FSP1 subcellular localization precedes lipid peroxidation and ferroptosis.

Application of Nanolive in Ferroptosis Research

Fig. 3: Representative delayed fluorescence images before and after treating wild-type Gpx4-Pfa1 cells overexpressing hFSP1-EGFP-Strep with 2.5 μM icFSP1. Scale bar = 10 μm (2 μm for magnified images). Arrows indicate the fusion of individual condensates. Refer to Video 5.b. The reversibility of hFSP1 condensates. Representative delayed fluorescence images before and after treating wild-type Gpx4 Pfa1 cells overexpressing hFSP1-EGFP-Strep with 2.5 μM icFSP1. After treating the cells with icFSP1 for 240 minutes, the medium was replaced with fresh medium without icFSP1, and recording was resumed. Scale bar = 10 μm. Refer to Video 6.

Video 5: Representative delayed fluorescence images before and after treating wild-type Gpx4-Pfa1 cells overexpressing hFSP1-EGFP-Strep with 2.5 μM icFSP1. The images show that after treating the cells with icFSP1, the punctate FSP1 clusters can merge over time. This indicates that these puncta have fluid characteristics.

Video 6: The plasticity of FSP1 condensates. Aggregated condensates disappear and revert to a diffuse state after washing away icFSP1, further indicating their fluidity.

Video 7: FRAP detection after treating Gpx4WT Pfa1 cells overexpressing hFSP1-EGFP-Strep with 2.5 μM icFSP1 for 120 minutes. Fluorescence recovery is observed after bleaching, indicating that molecules inside FSP1 droplets can freely exchange with externally diffused FSP1, indicating a fluid state.

Application of Nanolive in Ferroptosis Research

Fig. 4: Representative images of Pfa1 cells expressing hFSP1-EGFP-Strep mutant treated with 2.5 μM icFSP1. (After icFSP1 treatment, only wild-type hFSP1 and Lyn11-hFSP1G2A changed their subcellular localization to form hFSP1 condensates; no other mutants formed hFSP1 condensates after icFSP1 treatment, indicating that only FSP1 with a membrane localization sequence can undergo phase separation.) Scale bar = 10 μm.

Article link:

https://doi.org/10.1038/s41586-023-06255-6

In these two articles, a large number of Nanolive 3D cell imaging systems were used to study the mechanisms related to ferroptosis. Nanolive label-free 3D imaging, also known as live-cell micro-CT, successfully breaks through the optical diffraction limit of 167 nm through multi-angle diffraction field tomography technology, achieving a maximum lateral resolution of 75 nm, making it very suitable for nanoscale observation of live cell structures, such as various organelles. In 1994, super-resolution fluorescence microscopy (awarded the Nobel Prize in Chemistry in 2014) first broke through the optical diffraction limit of 200 nm; Nanolive is currently the only second optical imaging technology to break the 167 nm limit and the only technology capable of non-invasive, label-free live cell nanoscale imaging. This technology was published in Nature, Cotte Y. et al., Marker-free phase nanoscopy, Nature Photonics, 2013. The 3D Cell Explorer series is a tool for exploration that does not conflict with any existing technology, as the phenomena revealed by the 3D Cell Explorer represent the most authentic and essential changes in cells (the 3D Cell Explorer is currently the only technology that can construct label-free live cell 3D cellular structures at a scale of 167 nm), thus allowing researchers to explore from a completely new perspective, aiding in the discovery of new cellular activities and can be combined with traditional experimental methods for more in-depth research, including various advanced confocal, electron microscopy, atomic force, nuclear magnetic resonance, mass spectrometry, etc.

Application of Nanolive in Ferroptosis Research

Nanolive has the following features:

1. Label-free live cell imaging solutions

Application of Nanolive in Ferroptosis Research

2. Software—3D image acquisition, construction, and digital staining software

Application of Nanolive in Ferroptosis Research

3. Software—cell function analysis software

Application of Nanolive in Ferroptosis Research

(Label-free dynamic analysis of subcellular structures—mitochondria + lipid bodies)

Application of Nanolive in Ferroptosis Research

(Label-free dynamic analysis of the cytoskeleton)

Application of Nanolive in Ferroptosis Research

Nanolive real-time label-free 3D microscope series imaging systems are a newly developed technology that has been applied in several areas and is continuously expanding:

1. Observation and analysis of microbial infection in cells

2. Observation and analysis of the cell cycle

3. Analysis of drug mechanisms

4. Research on yeast cell division

5. 3D cell culture

6. Study of autophagy

7. Research on nanomaterials development

8. Observation of subcellular localization

9. Analysis of GFP or RFP transfection

10. H&E and HF detection without staining

11. Botanical research

12. Analysis of cell interactions

13. Research on apoptosis and mechanisms of cell death

14. Molecular co-localization analysis

15. Non-invasive identification of CTC cells

16. Tracking of microvesicles

17. Environmental biology

Application of Nanolive in Ferroptosis Research

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